Pacific Biosciences of California, Inc. (PACB) Earnings Call Transcript & Summary

September 15, 2026

NASDAQ US Health Care Life Sciences Tools and Services conference_presentation 26 min

Earnings Call Speaker Segments

Michael Podoll

analyst
#1

All right. Thank you very much for joining us today. My name is Michael Podoll. I lead Morgan Stanley's U.S. life science tools and diagnostics coverage and the health care investment banking group. It's my pleasure to introduce Mark Van Oene, Chief Executive Officer of Pacific Biosciences. So Mark, welcome.

Mark Van Oene

executive
#2

Thanks, Mike. Thanks for having me today.

Michael Podoll

analyst
#3

Absolutely. So congratulations again on stepping into the new CEO role. So as we've gotten settled into the company, from your vantage point, where do you see kind of the clearest opportunities to enhance the company's strategy or execution?

Mark Van Oene

executive
#4

Yes. Well, fortunately, I've been here for a little over 5 years, and Christian and I worked hand-in-hand on really defining where we could build out the portfolio and the strategy for PacBio. So this is not me making a wholesale change on the strategy. It really is what you asked about is the execution. And so I think really making sure that we're really focused on driving into some of these clinical markets where our technology is differentiated, and that's really around germline genomics right now. So think about carrier screening, newborn screening, rare disease. How do we better execute there? And a piece of this is just bringing the commercial organization together to properly drive and go after those markets and seize the momentum that we're starting to see both in Europe and now starting in the rest of the world. And so to me, it's a very execution-focused change more so than a big strategic shift for the organization.

Michael Podoll

analyst
#5

And what should your customers or investors expect to be different? Obviously, execution is a big part of this. But as you think about your 2 or 3 big priorities for the next kind of 12 to 18 months, what are those? And what kind of evidence should investors look for that you're driving that execution the way that you hope to?

Mark Van Oene

executive
#6

Yes. So first, we did just go through some restructuring and reduce some cash burn. And so look for me to land the restructuring for the organization and settle the rest of the commercial and R&D groups back down that have been impacted. And so that's top of mind for me is making sure that we're fully focused on moving forward from the restructuring. And you guys should look for the cash savings next year. We're talking about a $40 million savings between headcount and nonrecurring expenses. And so you should be looking for me over the next year to make sure that we deliver those savings on the operating expenses. From an overall product perspective, we just started shipping our SPRQ-Nx reagents. And for those of you that don't follow us closely, these are reagents that let us reuse the chip up to 3x. And so this multi-use chip really gives us the economics to think about how we can drive gross margin and drive some price elasticity in the market by lowering the price. And so this SPRQ-Nx transition that started in May is really important for us to execute on this year so that we exit 2026 with consumable growth, margin growth, setting ourselves up on Revio for 2027. The other big product, obviously, to execute on over the next 18 months is the high-throughput platform. SPRQ-Nx is giving us the economics to have conversations for large deals that we haven't been involved with in the past. And now people do want higher throughput platform. And so continuing to make sure that we're focused on this piece of the company was not impacted through the restructuring, but focused on driving that high-throughput platform through the development to execute on later on next year.

Michael Podoll

analyst
#7

And maybe just looking ahead maybe 3 to 5 years, longer-term type of time horizon, anything else that you'd like investors to understand about the broader vision for PacBio and how you see PacBio within the broader genomics ecosystem that I think is well known is an ever-changing environment?

Mark Van Oene

executive
#8

Yes. It's been fun for life science tools companies the last 2 years, hasn't it. I'm joking. It's been tough. And I think because of that, we're starting to see some new opportunities emerge that aren't the traditional funding sources for us. And the first is PacBio has been built in the most part from plant animal, nonhuman and some recent, more recently growing human academic research. I think we're here to catch and support that as much as we can, and we will because those are important customers and markets for us. But this drive into clinical is just critically important. And I think we have an opportunity in the longer term, 3 to 5 years with higher throughput technologies with even more affordable pricing per genome to really cement ourselves in the rare disease clinical diagnostics. And I say that because in the rare disease odyssey, it's a bunch of different technologies that are used that we can consolidate onto our test. And so being able to change the economics of the labs that can consolidate tests to be able to change the economics of health systems that are deploying those tests and drive up the clinical evidence and clinical utility of combining those is a real opportunity and publications are coming out regularly now to show the increased diagnostic yield and benefits of using HiFi as frontline. And so if I think about 3 to 5 years, it's making HiFi a frontline genetic test using whole genome sequencing, not just a reflex or not just a subset, but a frontline test for rare disease diagnostics. I also see a big opportunity emerging. There's -- and you're seeing it in the tools companies in our space as well. There's this intersection of AI and health care. And it's data hungry. It's data, the comprehensiveness of our data is meaningful for them. And so I do think over the next 3 to 5 years, you'll see us get funding from more of these AI therapeutic companies and nontraditional customers. And so I think of this as a new category of customers to start to drive the understanding of multimodal data into different models of biology and health care and therapeutics and diagnostics. And so I think that will likely replace academic and government in many ways and it's a real opportunity for us given the quality of the data that we have.

Michael Podoll

analyst
#9

And you mentioned SPRQ-Nx and the rollout there. What are you kind of hearing from your early customers? And how should investors kind of understand what successful adoption might look like?

Mark Van Oene

executive
#10

Yes. So the early data has been really, really encouraging with the SPRQ-Nx rollout. Again, it's only been, what, end of May, we started shipping. So it's only been a few months of getting really meaningful feedback. But the customers are experiencing really good first and second runs, a little bit less yield on the third runs. And so a lot of it is just working through the workflow and the timing and how that will play out in the customers' hands. And our team is fully equipped to have those conversations. And I think the customers are understanding that dynamic a little bit better now. But what they do love is the economics. And so this, we've been able to lower our list price by 30%. That is driving new conversations. That is driving new projects for us and higher scale projects. It's leading to some fleet expansion in cases where now they're getting enough interest that they need to add some Revio to their fleet. And so it is doing what we had expected to do both with current customers and then driving new projects and growth. I think for investors, you should really look at how long does this transition take? You saw an impact in the second quarter, our utilization and the average, not the utilization, but the pull-through per instrument per year came down closer to $200,000 in the second quarter. You should expect that to continue through this quarter. But by the end of this year, I do think this is a 2-quarter transition. And by the end of this year, we should be getting the revenues from the consumable product line back up again and start to drive that annual pull-through back up again, again, setting ourselves up for 2027. The other thing you should start to look for is this is the first product that's going to help us start to increase the gross margin for the company again more meaningfully. And so we have the margin that as we drive adoption and drive utilization of this, you're going to start to see us recover some of the gross margin that we had to hit on last quarter.

Michael Podoll

analyst
#11

Got it. And any particular barriers that you want investors to be just aware of as you go through the earlier phases of this new adoption?

Mark Van Oene

executive
#12

No, I don't think it's a barrier. To me, the slowness has just been getting people to put testing into clinical production. And so it's not a barrier. It's more just getting through that process. Just like we have a product development process for making and commercializing our products. These labs have a commercialization process of taking the testing that are validated in R&D, transfer that to their production or manufacturing sites and training their commercial teams. And so to me, it's just, let's pay attention to the process of getting this going at scale with the SPRQ-Nx in the clinic. But they're on board, they're validating, they're working with us. And now I just think we can do a better job of supporting them as a customer segment overall.

Michael Podoll

analyst
#13

And as you look across the different clinical applications, what do you think is most likely to become the most meaningful beachhead for HiFi? Or how do you think about that?

Mark Van Oene

executive
#14

So it's germline genomics initially. And it depends on where in the world you are. Right now, we're seeing great growth and success with whole genome sequencing in Europe. And the Revio and the sample volumes in the academic and medical centers in Europe are of the thousands of samples, not of the tens or hundreds of thousands of samples. And so we're seeing great success with rare disease whole genome sequencing in Europe. And I expect that to continue and expand across different hospitals within the countries that are supporting that as a frontline test. And I think the nuance here is Europe has already started to transition this to frontline, not reflex, not a subset, but let's make this a frontline test for these different rare disease conditions. And when I talk about transitioning that success in Europe to the rest of the world, it's about getting it to frontline. The fragmented U.S. system and the centralized testing in the U.S. does not afford itself to the same ways of thinking about deploying this as it is in Europe. And so in the U.S., I think the earlier clinical test adoption will likely be carrier screening. We've already seen Quest launched ataxia panels. I expect others to launch ataxia carrier screening panels, more targeted panels in advance of going fully into the whole genome sequencing for rare undiagnosed disease. And I only say that because of the volumes. We can do hundreds of thousands of samples on Revio for targeted approaches. We can't yet do hundreds of thousands of samples well on Revio for whole genome sequencing in the U.S. And so it's getting them started. And so the activity in the U.S. is let's get them started on subsets of reflex testing so that they're scaled and ready because I do think longer term, the higher throughput platform and economics will give us a real opportunity to drive into whole genome sequencing here in the U.S. and Asian markets as well.

Michael Podoll

analyst
#15

Maybe just shifting gears for a moment. As you think about kind of the U.S. academic or government research funding markets, based on where we are today, recognizing there's been a massive amount of volatility here over the last couple of years, how would you characterize the funding environment today from your vantage point?

Mark Van Oene

executive
#16

Yes, it's been a tough few years. Even before this administration, it was hard with the NIH funding for us as grants got smaller and more decentralized and supported the smaller researchers. And so I think we had challenges even before this administration, but it's continued and it's the uncertainty. It's the uncertainty of the timing of the funding, it's the uncertainty of the next round of funding. It's middle of September, I was hoping there might be a flush. I haven't seen a budget flush. I don't know if others in our industry are yet, but I haven't seen, traditionally, we would never count on it or never bake it into our forecast, but love the upside of a budget flush. I'm not seeing that this September either. And so I think it's just the uncertainty. And so we're not expecting any major changes in the U.S. NIH academic environment for us, which is why you're seeing us focus on different sources of funding, biopharma, philanthropy, different types of clinical opportunities. I think the U.S. business was relatively flat because we're growing the clinical business to offset the NIH shortfalls, but it's the reason why we're not growing. Now that being said, we are absolutely poised to take full advantage of that if the money starts flowing again.

Michael Podoll

analyst
#17

And I mean, are there particular areas where you're seeing any resilient demand? Or how do you think about more in the kind of near term or medium term if the funding environment remains more uncertain, does that change how you think about different priorities within the company?

Mark Van Oene

executive
#18

Well, that's part of the why the new focus on better supporting the clinical markets. And when I say that is we have really good workflows for academics right now, but we kind of stop, right? So we've invested in all of the DNA prep and the library prep and the automation around that. So we've invested in to feed the Revios. We've invested in computational biology tools to get to variant calls across a number of different pipelines. Great for the academics or the really sophisticated clinical labs. We haven't really invested in the end of the workflow through interpretation and clinical reporting. And so thinking about how we partner into that becomes really important and driving the recurring revenue then from those clinical customers in a more decentralized way. So I think we're going to be able to rely on more routine sample volumes and more routine revenue in the clinic in general as one. We're also seeing renewed interest from biopharma and not just for access to data, but larger data sets for enrichment of their data sets for their own target discovery work. And so I do think biopharma is a really important other segment for us to spend some resources and time on it. Outside of just clinical and preclinical trial recruitment, I think it is still discovery work for biopharma through enrichment with HiFi.

Michael Podoll

analyst
#19

Got it. And with the recent restructuring, obviously, you talked a little bit about the focus now on clinical. Any other changes in kind of the product road map or your capital allocation priorities or anything else that you think is important for investors to understand?

Mark Van Oene

executive
#20

I think we've done the hard work. It's, we've had to go through 3 restructurings in 3 years, and we've exited the short-read business that we thought was going to help us get the piece of oncology that long reads can't really go after very well. And so I think we've done a lot of the hard work from a capital deployment and are very focused on Menlo Park. I would say we've started in-sourcing all of our Vega manufacturing. And so we look for me to even better utilize the space we have in Menlo Park to better absorb that manufacturing footprint. So think of it as just optimizing and further enhancing the capital deployment there. The biggest expense right now is the R&D program around the high-throughput platform. And that's not going to change. We are committed to getting that out, and that's the priority. So to me, it's stopping all the distractions of other things and really focusing on that. I don't want to add a bunch of new stuff to the development pipeline. I want us to be successful in launching, creating and launching our complete portfolio of the 3 different HiFi sequencing technologies.

Michael Podoll

analyst
#21

Got it. Anything else within the R&D pipeline that still remains a focus? Or is it pretty well focused, as you mentioned?

Mark Van Oene

executive
#22

Yes, we have some updates to the Kinnex RNA. We have some smaller updates to some improved automation around library prep. But I see a lot of these efforts now, whether it's in front of the sequencer or in the back end because we're still making big investments in the data and the use of the data in the back end. I see those still as extensions of our high throughput. You can't launch a high-throughput platform in the market and not fully enable people to access and utilize that data. And so when I talk about the R&D programs on high throughput, it is end-to-end. I don't want you to confuse that for just making another sequencing box. It really does encompass the utility of the data on the back end. And that includes things like building a software stack and partnering to a software stack. I think of it as precision health intelligence, other people will call it an AI platform. To me, it's creating the accessibility of the data for customers that are generating it or other people that just want to access the data as a product. And so how do we productize our software in a better way so that people can come and through data exchange, get access to what we have and better leverage the information that we're generating.

Michael Podoll

analyst
#23

That's maybe a helpful topic to just double-click on. What are you seeing today? How should investors think about or even customers think about your capabilities there on the software side? What does that look like a year or 2 from now?

Mark Van Oene

executive
#24

Yes. We've made big investments in all of the secondary analysis pipelines. And so looking at phasing and structural variations and copy number and all the unique stuff that hasn't really been built out, paralogs that could go on, methylation, like there's all these different things that our data encompasses that hasn't been built out because it's not really a native short read set of information. And so we've built and created the pipelines for that. And now we've done a lot to really integrate those and streamline those so that they're more useful. We've also started incorporating those into some of the interfaces that our partners have. And a good example of this is what we call HiFi Solves. And so this is a federated network of hospital systems around the world that can run their HiFi data, that can share their HiFi data, and now they can actually run the secondary analysis and some new tertiary analysis pipelines within that federated network. They can query it to look for low frequencies. And so we're starting to build up the sovereign data infrastructure and the federated network for people to go and learn from other labs that are generating the data. And so I think the way we have to build the infrastructure and the software and make it more seamless for people to access is a really important part of this next phase of PacBio.

Michael Podoll

analyst
#25

And maybe at a higher level, how do you want investors to think about what has to go right for PacBio to kind of reaccelerate growth well into next year and beyond? And I guess what are some of the indicators that you're paying attention to that will be good kind of evidence that you're getting the traction that you've set out to execute on?

Mark Van Oene

executive
#26

Yes. I'll start with SPRQ-Nx because it's the most immediate. We need a successful transition to SPRQ-Nx through 2027 to start to drive the gross margin above the 40% threshold that we're under right now. And so we need, and you should be watching SPRQ-Nx and the gross margin inflection that can come from that. It's also really important stepping stone. A lot of the deals and multisystem we're doing around SPRQ-Nx right now, multisystem Revio deals are customers that fully have the demand for the high throughput, and we've figured out how to price these deals to get them ready and scaled for the high throughput when we launch it later next year. And so I do think watching the utilization of Revios over the course of 2027 and set up for higher throughput is an important part because that's going to mean a more seamless transition in the community for embracing higher throughput technologies with us because not many labs have ever run 10,000 genomes a year. And so they have to prepare for that. And so I think SPRQ-Nx is a really important first indicator. The second to me is the clinical growth, especially around consumables. If you take out the lumpiness of when they add infrastructure or don't from Revio, I would look at the clinical consumable growth as a real indicator of getting into that routine testing. You talked about the recurring revenue, the routine testing. That to me is how do we keep growing our clinical consumables 50-plus percent over the course of the next couple of years. And then the third thing I'll say is the real growth starts to happen from the high-throughput platform, high-throughput technologies and sequencing is where the majority of the revenues are made. It's where the majority of the margin comes from. And so for us to really inflect both revenue and margin as a company, it's making sure we execute on the high-throughput platform next year, build a pipeline of sales for that, execute on getting it out there and then drive the utilization because in my mind, that's what sets up 2028 with the gross margin and the higher utilization of a high-throughput technology to get to cash flow breakeven.

Michael Podoll

analyst
#27

You mentioned AI as being something of an emerging theme. How should investors think about the relative value of kind of long-read sequencing versus short read and the type of data that you all generate and why that could be so valuable in this ecosystem?

Mark Van Oene

executive
#28

Yes, I've been really excited by some of the learnings of the first deal we've done in and around this AI world of health care. And that was with the Basecamp Research group in England. And for those of you who don't know, they're building a foundation model biology based on 1 trillion gene atlas of genes found in soil samples. And so these are metagenomic samples, bacteria. The diversity of the genes and biology there, they believe it's going to help them build a better model for looking at antibiotics and vaccines and other therapeutics. And so we started a deal with them where they're now sending us the soil samples and the DNA from the soil samples around the world to sequence of HiFi to help improve their model. And the early indicators are just really encouraging that higher quality data is what they've been looking for, and I expect this to continue. And so Basecamp has been a real example of a large deal for PacBio to get involved in using its data to build a model of biology for therapeutics and therapeutic development. And so I expect us to have more of those over time. And the differentiator to me is the comprehensiveness and the quality of the data. If you're going to go and build these models, let's enrich and use the most comprehensive genome or transcriptome, and I don't think this will just be genomics. We're having conversations around using Kinnex and transcriptomics for this as well. And build the most comprehensive model that we can, and that's future-proof because you're going to want to go back to those samples and that data set over time and retrain and relook at your model. And we have the most complete genome, which I think gives us a really good opportunity to make this a meaningful part of our business over time. Now that being said, I'm not putting any of this in our base case model. And so when we talk about gross margin and we talk about time to cash flow breakeven, that is outside of anything that I think would be a unique category and a new category of customers here for us.

Michael Podoll

analyst
#29

Right. Maybe just to round it out, what's one thing that you think is maybe most underappreciated or most misunderstood about PacBio?

Mark Van Oene

executive
#30

I think the biggest breakthrough internally, I think that we recognize it, but I don't think externally people realize how big a breakthrough being able to use our SMRT Cell more than once was. It is the majority of the cost of our sequencing, and it's what's held us back from being able to be economical at large-scale programs because we were throwing away this really expensive chip every time we sequenced. And so being able to amortize that over 2 or 3 or over time, 4 or 5 uses of sequencing really starts to change the way we think about not just the price that we can do to the market, but the gross margin as a company. And so for the first time, I'm staring at a product line that will have the gross margin that will actually make us a sustainable company. And one of the biggest questions I had in advance of even joining PacBio, forget about this recent transition, but even joining PacBio was, do they have a technology that will give them the gross margin to be successful. And so I don't think people appreciate how big a breakthrough that multi-use of the SMRT Cell was to really start to inflect the revenue through elasticity of pricing and inflect the company through the gross margin it affords us.

Michael Podoll

analyst
#31

All right. Well, thank you very much for joining us. It's been a pleasure to have you here.

Mark Van Oene

executive
#32

Great. Thanks, Mike.

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